Hi Bhava,
The idea of pulsing is based on research that shows borrelia reacts to antibiotics with some compensatory mechanisms to tolerate the antibiotics. See eg:
Persister mechanisms in Borrelia burgdorferi: implications for improved intervention
https://www.ncbi.nlm.nih.gov/pmc/articles/pmc4576169/Borrelia burgdorferi, the Lyme disease spirochete, possesses genetically-encoded responses to doxycycline, but not to amoxicillin
https://www.ncbi.nlm.nih.gov/pmc/articles/pmc9524633/Dr J usually recommends taking antibiotics every other day (ie Monday/Wednesday/Friday). The idea is to let the bacteria recover a little bit, such that it stops some of the antibiotic tolerance mechanisms.
I've done this, and it seems fine. I also find that taking a day off lets my immune system recover, and reduces the diarrhea somewhat.
This research was done mainly with doxycycline and amoxicillin, and some similar antibiotics. What is debatable is whether this would be useful with other antibiotics that have a different mechanism of action (such as dapsone) and whether it is helpful to take longer breaks of a week or more.
My personal experience is that this pulsing schedule doesn't work well with certain meds. I also encountered a peculiar problem, particularly with nucleotide analogues, where I would get a distinct burning smell which I suspect is a byproduct of superoxide or nitric oxide production. The immune system produces these molecules to kill bacteria, so this implies that some of the bacteria weren't dead. This is bad, as these reactive molecules are rather damaging and unhealthy, so when I smell this, I want to change my antibiotic protocol.
Regarding dapsone specifically, Dr H recommends taking it for several days in a row, and not every other day.
I would agree that the low hemoglobin is probably bartonella. I don't know if rifampicin would be useful. I got a bartonella infection that seemed to be resistant to rifampicin, so I used other antibiotics.
https://www.healingwell.com/community/default.aspx?f=30&m=4345421&g=4345620#m4345620I didn't try to treat both borrelia and bartonella at the same time because I thought the herx would be too much. Dr H seems to disagree, and recommends increasing the dapsone and MB to kill bartonella.
Regarding microclotting and TTP, this seems to be mainly due to bacteria or viruses causing inflammation in the endothelium. When I took more antibiotics, which prevented borrelia from moving around and getting into the endothelium, then the clots stopped happening. Microclotting can also be caused by covid-19, but I found that to be treatable with atovaquone or nitazoxanide.