Posted 10/10/2018 12:39 AM (GMT -5)
In general, emulsifiers help dissimilar substances to mix. Think about emulsifiers in salad dressing that allow oil and water to mix (form an emulsion although not dissolving in each other) so they don't separate out so quickly.
There is some evidence that emulsifiers increase mixing in the mucus layer lining the colon. There are bacteria that are beneficial as long as they remain in the foodstream (chime or feces), but if they penetrate the mucus layer and into the intestinal lining, it triggers an immune response, e.g., inflammation. Mouse studies on a couple of emulsifiers (polysorbate 80 and carboxymethylcellulose) showed increases in some bacteria in the lining of the colon.
So basically emulsifiers can cause bacteria to migrate to where they shouldn't be, and trigger inflammation.